JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 23:14 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2pifa1.name2015-04-17 18:46 0 Job name flag file
[ ]jp_hiUZhEb.align2015-04-17 23:13 135KPSIBLAST alignment in FASTA format
[TXT]jp_hiUZhEb.als2015-04-17 23:13 3.9KAlscript command file for PS/PDF output
[ ]jp_hiUZhEb.blast.gz2015-04-17 23:13 611KCompressed PSIBLAST output file
[TXT]jp_hiUZhEb.coils.csv2015-04-17 23:13 1.5KCOILS output in CSV format
[ ]jp_hiUZhEb.coilseq.lupas_142015-04-17 23:13 11KCOILS output, window length 14
[ ]jp_hiUZhEb.coilseq.lupas_212015-04-17 23:13 11KCOILS output, window length 21
[ ]jp_hiUZhEb.coilseq.lupas_282015-04-17 23:13 11KCOILS output, window length 28
[ ]jp_hiUZhEb.concise2015-04-17 23:13 271KPrediction: coiled-coil, solvent, alignment
[ ]jp_hiUZhEb.concise.blc2015-04-17 23:13 137KBLC format prediction and alignment data
[ ]jp_hiUZhEb.concise.fasta2015-04-17 23:13 137KPrediction: coiled-coil, solvent, alignment
[ ]jp_hiUZhEb.concise.pdf2015-04-17 23:13 967KPDF prediction and alignment data
[ ]jp_hiUZhEb.concise.ps2015-04-17 23:13 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_hiUZhEb.fasta2015-04-17 20:49 268 Input query sequence in FASTA format
[ ]jp_hiUZhEb.full_MSA.fasta2015-04-17 23:13 781KFull MSA before JPred filters in FASTA
[TXT]jp_hiUZhEb.full_MSA.fasta.noGaps.html2015-04-17 23:14 303KFull MSA before JPred filters in FASTA
[TXT]jp_hiUZhEb.full_MSA.fasta.withGaps.html2015-04-17 23:14 3.3MFull MSA before JPred filters in FASTA
[ ]jp_hiUZhEb.hmm2015-04-17 23:13 47KHHMer2 profile of the alignment
[TXT]jp_hiUZhEb.html2015-04-17 23:13 252KHTML prediction and alignment data
[ ]jp_hiUZhEb.input2015-04-17 18:46 259 Raw input data for analysis
[ ]jp_hiUZhEb.jalview2015-04-17 23:13 5.8KJalview annotation file for alignment
[ ]jp_hiUZhEb.jnet2015-04-17 23:13 9.2KJnet secondary structure output
[TXT]jp_hiUZhEb.profile2015-04-17 23:00 40KPSIBLAST profile from alignment
[ ]jp_hiUZhEb.pssm2015-04-17 23:13 54KPSIBLAST PSSM for Jnet
[TXT]jp_hiUZhEb.results.html2016-02-15 12:20 109KJPred results page
[TXT]jp_hiUZhEb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_hiUZhEb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_hiUZhEb.seq2015-04-17 18:46 268 Sequence data file
[TXT]jp_hiUZhEb.simple.html2015-04-17 23:13 1.8KBrief HTML: sequence and prediction only
[TXT]jp_hiUZhEb.svg.html2015-04-17 23:14 101KJalview SVG summary of results
[ ]jp_hiUZhEb.tar.gz2015-04-17 23:14 2.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.