JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2qsba1.name2015-04-17 17:34 0 Job name flag file
[ ]jp_W1bB7Ta.align2015-04-17 18:53 8.5KPSIBLAST alignment in FASTA format
[TXT]jp_W1bB7Ta.als2015-04-17 18:53 1.7KAlscript command file for PS/PDF output
[ ]jp_W1bB7Ta.blast.gz2015-04-17 18:53 17KCompressed PSIBLAST output file
[TXT]jp_W1bB7Ta.coils.csv2015-04-17 18:53 540 COILS output in CSV format
[ ]jp_W1bB7Ta.coilseq.lupas_142015-04-17 18:53 3.6KCOILS output, window length 14
[ ]jp_W1bB7Ta.coilseq.lupas_212015-04-17 18:53 3.6KCOILS output, window length 21
[ ]jp_W1bB7Ta.coilseq.lupas_282015-04-17 18:53 3.6KCOILS output, window length 28
[ ]jp_W1bB7Ta.concise2015-04-17 18:53 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_W1bB7Ta.concise.blc2015-04-17 18:53 9.6KBLC format prediction and alignment data
[ ]jp_W1bB7Ta.concise.fasta2015-04-17 18:53 9.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_W1bB7Ta.concise.pdf2015-04-17 18:53 66KPDF prediction and alignment data
[ ]jp_W1bB7Ta.concise.ps2015-04-17 18:53 1.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_W1bB7Ta.fasta2015-04-17 18:50 99 Input query sequence in FASTA format
[ ]jp_W1bB7Ta.full_MSA.fasta2015-04-17 18:53 13KFull MSA before JPred filters in FASTA
[TXT]jp_W1bB7Ta.full_MSA.fasta.noGaps.html2015-04-17 18:53 26KFull MSA before JPred filters in FASTA
[TXT]jp_W1bB7Ta.full_MSA.fasta.withGaps.html2015-04-17 18:53 42KFull MSA before JPred filters in FASTA
[ ]jp_W1bB7Ta.hmm2015-04-17 18:53 16KHHMer2 profile of the alignment
[TXT]jp_W1bB7Ta.html2015-04-17 18:53 35KHTML prediction and alignment data
[ ]jp_W1bB7Ta.input2015-04-17 17:34 92 Raw input data for analysis
[ ]jp_W1bB7Ta.jalview2015-04-17 18:53 2.6KJalview annotation file for alignment
[ ]jp_W1bB7Ta.jnet2015-04-17 18:53 3.2KJnet secondary structure output
[TXT]jp_W1bB7Ta.profile2015-04-17 18:52 14KPSIBLAST profile from alignment
[ ]jp_W1bB7Ta.pssm2015-04-17 18:53 18KPSIBLAST PSSM for Jnet
[TXT]jp_W1bB7Ta.results.html2016-02-15 12:20 44KJPred results page
[TXT]jp_W1bB7Ta.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_W1bB7Ta.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_W1bB7Ta.seq2015-04-17 17:34 99 Sequence data file
[TXT]jp_W1bB7Ta.simple.html2015-04-17 18:53 1.1KBrief HTML: sequence and prediction only
[TXT]jp_W1bB7Ta.svg.html2015-04-17 18:53 36KJalview SVG summary of results
[ ]jp_W1bB7Ta.tar.gz2015-04-17 18:53 127KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.