JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:57 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2v89a_.name2015-04-17 17:35 0 Job name flag file
[ ]jp_RbrK7W_.align2015-04-17 18:57 2.7KPSIBLAST alignment in FASTA format
[TXT]jp_RbrK7W_.als2015-04-17 18:57 2.1KAlscript command file for PS/PDF output
[ ]jp_RbrK7W_.blast.gz2015-04-17 18:57 17KCompressed PSIBLAST output file
[TXT]jp_RbrK7W_.coils.csv2015-04-17 18:57 498 COILS output in CSV format
[ ]jp_RbrK7W_.coilseq.lupas_142015-04-17 18:57 3.3KCOILS output, window length 14
[ ]jp_RbrK7W_.coilseq.lupas_212015-04-17 18:57 3.3KCOILS output, window length 21
[ ]jp_RbrK7W_.coilseq.lupas_282015-04-17 18:57 3.3KCOILS output, window length 28
[ ]jp_RbrK7W_.concise2015-04-17 18:57 8.4KPrediction: coiled-coil, solvent, alignment
[ ]jp_RbrK7W_.concise.blc2015-04-17 18:57 3.8KBLC format prediction and alignment data
[ ]jp_RbrK7W_.concise.fasta2015-04-17 18:57 3.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_RbrK7W_.concise.pdf2015-04-17 18:57 22KPDF prediction and alignment data
[ ]jp_RbrK7W_.concise.ps2015-04-17 18:57 407KPrediction: coiled-coil, solvent, alignment
[ ]jp_RbrK7W_.fasta2015-04-17 18:52 92 Input query sequence in FASTA format
[ ]jp_RbrK7W_.full_MSA.fasta2015-04-17 18:57 16KFull MSA before JPred filters in FASTA
[TXT]jp_RbrK7W_.full_MSA.fasta.noGaps.html2015-04-17 18:57 32KFull MSA before JPred filters in FASTA
[TXT]jp_RbrK7W_.full_MSA.fasta.withGaps.html2015-04-17 18:57 52KFull MSA before JPred filters in FASTA
[ ]jp_RbrK7W_.hmm2015-04-17 18:57 15KHHMer2 profile of the alignment
[TXT]jp_RbrK7W_.html2015-04-17 18:57 16KHTML prediction and alignment data
[ ]jp_RbrK7W_.input2015-04-17 17:35 85 Raw input data for analysis
[ ]jp_RbrK7W_.jalview2015-04-17 18:57 2.4KJalview annotation file for alignment
[ ]jp_RbrK7W_.jnet2015-04-17 18:57 2.9KJnet secondary structure output
[TXT]jp_RbrK7W_.profile2015-04-17 18:56 13KPSIBLAST profile from alignment
[ ]jp_RbrK7W_.pssm2015-04-17 18:57 17KPSIBLAST PSSM for Jnet
[TXT]jp_RbrK7W_.results.html2016-02-15 12:20 43KJPred results page
[TXT]jp_RbrK7W_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RbrK7W_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RbrK7W_.seq2015-04-17 17:35 92 Sequence data file
[TXT]jp_RbrK7W_.simple.html2015-04-17 18:57 1.2KBrief HTML: sequence and prediction only
[TXT]jp_RbrK7W_.svg.html2015-04-17 18:57 35KJalview SVG summary of results
[ ]jp_RbrK7W_.tar.gz2015-04-17 18:57 74KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.