A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:01 | 4.7K | JPred server log file |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| d2vhka_.name | 2015-04-17 18:11 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_L8KGVdx.align | 2015-04-17 20:00 | 214K | PSIBLAST alignment in FASTA format |
| jp_L8KGVdx.als | 2015-04-17 20:00 | 2.8K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_L8KGVdx.blast.gz | 2015-04-17 19:59 | 1.9M | Compressed PSIBLAST output file |
| jp_L8KGVdx.coils.csv | 2015-04-17 20:00 | 1.2K | COILS output in CSV format |
| jp_L8KGVdx.coilseq.lupas_14 | 2015-04-17 20:00 | 8.7K | COILS output, window length 14 |
| jp_L8KGVdx.coilseq.lupas_21 | 2015-04-17 20:00 | 8.7K | COILS output, window length 21 |
| jp_L8KGVdx.coilseq.lupas_28 | 2015-04-17 20:00 | 8.7K | COILS output, window length 28 |
| jp_L8KGVdx.concise | 2015-04-17 20:00 | 422K | Prediction: coiled-coil, solvent, alignment |
| jp_L8KGVdx.concise.blc | 2015-04-17 20:00 | 214K | BLC format prediction and alignment data |
| jp_L8KGVdx.concise.fasta | 2015-04-17 20:00 | 216K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_L8KGVdx.concise.pdf | 2015-04-17 20:00 | 1.3M | PDF prediction and alignment data |
| jp_L8KGVdx.concise.ps | 2015-04-17 20:00 | 25M | Prediction: coiled-coil, solvent, alignment |
| jp_L8KGVdx.fasta | 2015-04-17 19:52 | 221 | Input query sequence in FASTA format |
| jp_L8KGVdx.full_MSA.fasta | 2015-04-17 19:59 | 3.2M | Full MSA before JPred filters in FASTA |
| jp_L8KGVdx.full_MSA.fasta.noGaps.html | 2015-04-17 20:00 | 540K | Full MSA before JPred filters in FASTA |
| jp_L8KGVdx.full_MSA.fasta.withGaps.html | 2015-04-17 20:00 | 9.6M | Full MSA before JPred filters in FASTA |
| jp_L8KGVdx.hmm | 2015-04-17 20:00 | 39K | HHMer2 profile of the alignment |
| jp_L8KGVdx.html | 2015-04-17 20:00 | 413K | HTML prediction and alignment data |
| jp_L8KGVdx.input | 2015-04-17 18:11 | 213 | Raw input data for analysis |
| jp_L8KGVdx.jalview | 2015-04-17 20:00 | 4.8K | Jalview annotation file for alignment |
| jp_L8KGVdx.jnet | 2015-04-17 20:00 | 7.6K | Jnet secondary structure output |
| jp_L8KGVdx.profile | 2015-04-17 19:58 | 33K | PSIBLAST profile from alignment |
| jp_L8KGVdx.pssm | 2015-04-17 20:00 | 44K | PSIBLAST PSSM for Jnet |
| jp_L8KGVdx.results.html | 2016-02-15 12:20 | 89K | JPred results page |
| jp_L8KGVdx.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_L8KGVdx.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_L8KGVdx.seq | 2015-04-17 18:11 | 221 | Sequence data file |
| jp_L8KGVdx.simple.html | 2015-04-17 20:00 | 1.6K | Brief HTML: sequence and prediction only |
![[TXT]](jp_L8KGVdx.svg.html) | jp_L8KGVdx.svg.html | 2015-04-17 20:01 | 80K | Jalview SVG summary of results |
| jp_L8KGVdx.tar.gz | 2015-04-17 20:01 | 4.4M | Archive containing complete results |
