JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:18 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2z16a_.name2015-04-17 16:24 0 Job name flag file
[ ]jp_KbKxGwa.align2015-04-17 17:18 1.8KPSIBLAST alignment in FASTA format
[TXT]jp_KbKxGwa.als2015-04-17 17:18 2.8KAlscript command file for PS/PDF output
[ ]jp_KbKxGwa.blast.gz2015-04-17 17:18 4.4KCompressed PSIBLAST output file
[TXT]jp_KbKxGwa.coils.csv2015-04-17 17:18 948 COILS output in CSV format
[ ]jp_KbKxGwa.coilseq.lupas_142015-04-17 17:18 6.4KCOILS output, window length 14
[ ]jp_KbKxGwa.coilseq.lupas_212015-04-17 17:18 6.4KCOILS output, window length 21
[ ]jp_KbKxGwa.coilseq.lupas_282015-04-17 17:18 6.4KCOILS output, window length 28
[ ]jp_KbKxGwa.concise2015-04-17 17:18 10KPrediction: coiled-coil, solvent, alignment
[ ]jp_KbKxGwa.concise.blc2015-04-17 17:18 4.2KBLC format prediction and alignment data
[ ]jp_KbKxGwa.concise.fasta2015-04-17 17:18 3.5KPrediction: coiled-coil, solvent, alignment
[ ]jp_KbKxGwa.concise.pdf2015-04-17 17:18 29KPDF prediction and alignment data
[ ]jp_KbKxGwa.concise.ps2015-04-17 17:18 500KPrediction: coiled-coil, solvent, alignment
[ ]jp_KbKxGwa.fasta2015-04-17 16:54 168 Input query sequence in FASTA format
[ ]jp_KbKxGwa.full_MSA.fasta2015-04-17 17:18 8.0KFull MSA before JPred filters in FASTA
[TXT]jp_KbKxGwa.full_MSA.fasta.noGaps.html2015-04-17 17:18 12KFull MSA before JPred filters in FASTA
[TXT]jp_KbKxGwa.full_MSA.fasta.withGaps.html2015-04-17 17:18 19KFull MSA before JPred filters in FASTA
[ ]jp_KbKxGwa.hmm2015-04-17 17:18 29KHHMer2 profile of the alignment
[TXT]jp_KbKxGwa.html2015-04-17 17:18 20KHTML prediction and alignment data
[ ]jp_KbKxGwa.input2015-04-17 16:24 160 Raw input data for analysis
[ ]jp_KbKxGwa.jalview2015-04-17 17:18 3.9KJalview annotation file for alignment
[ ]jp_KbKxGwa.jnet2015-04-17 17:18 5.6KJnet secondary structure output
[TXT]jp_KbKxGwa.profile2015-04-17 17:10 25KPSIBLAST profile from alignment
[ ]jp_KbKxGwa.pssm2015-04-17 17:18 33KPSIBLAST PSSM for Jnet
[TXT]jp_KbKxGwa.results.html2016-02-15 12:20 73KJPred results page
[TXT]jp_KbKxGwa.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KbKxGwa.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KbKxGwa.seq2015-04-17 16:24 168 Sequence data file
[TXT]jp_KbKxGwa.simple.html2015-04-17 17:18 1.4KBrief HTML: sequence and prediction only
[TXT]jp_KbKxGwa.svg.html2015-04-17 17:18 65KJalview SVG summary of results
[ ]jp_KbKxGwa.tar.gz2015-04-17 17:18 70KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.