A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[ ]](/icons/unknown.gif){kind=icon} | jp_d8TBDV5.input | 2015-04-17 18:12 | 50 | Raw input data for analysis |
| jp_d8TBDV5.seq | 2015-04-17 18:12 | 56 | Sequence data file |
![[TXT]](/icons/text.gif){kind=icon} | d3ag3m_.name | 2015-04-17 18:12 | 0 | Job name flag file |
| jp_d8TBDV5.fasta | 2015-04-17 19:55 | 56 | Input query sequence in FASTA format |
| jp_d8TBDV5.profile | 2015-04-17 19:59 | 7.3K | PSIBLAST profile from alignment |
![[ ]](/icons/compressed.gif){kind=icon} | jp_d8TBDV5.blast.gz | 2015-04-17 20:01 | 4.5K | Compressed PSIBLAST output file |
| jp_d8TBDV5.full_MSA.fasta | 2015-04-17 20:01 | 3.5K | Full MSA before JPred filters in FASTA |
| jp_d8TBDV5.align | 2015-04-17 20:01 | 1.7K | PSIBLAST alignment in FASTA format |
| jp_d8TBDV5.pssm | 2015-04-17 20:01 | 9.2K | PSIBLAST PSSM for Jnet |
| jp_d8TBDV5.hmm | 2015-04-17 20:01 | 8.1K | HHMer2 profile of the alignment |
| jp_d8TBDV5.jnet | 2015-04-17 20:01 | 1.7K | Jnet secondary structure output |
| jp_d8TBDV5.coilseq.lupas_21 | 2015-04-17 20:01 | 1.8K | COILS output, window length 21 |
| jp_d8TBDV5.coilseq.lupas_14 | 2015-04-17 20:01 | 1.8K | COILS output, window length 14 |
| jp_d8TBDV5.coilseq.lupas_28 | 2015-04-17 20:01 | 1.8K | COILS output, window length 28 |
| jp_d8TBDV5.coils.csv | 2015-04-17 20:01 | 288 | COILS output in CSV format |
| jp_d8TBDV5.concise | 2015-04-17 20:01 | 4.9K | Prediction: coiled-coil, solvent, alignment |
| jp_d8TBDV5.html | 2015-04-17 20:01 | 13K | HTML prediction and alignment data |
| jp_d8TBDV5.simple.html | 2015-04-17 20:01 | 1.0K | Brief HTML: sequence and prediction only |
| jp_d8TBDV5.jalview | 2015-04-17 20:01 | 1.7K | Jalview annotation file for alignment |
| jp_d8TBDV5.concise.fasta | 2015-04-17 20:01 | 2.2K | Prediction: coiled-coil, solvent, alignment |
| jp_d8TBDV5.concise.blc | 2015-04-17 20:01 | 2.4K | BLC format prediction and alignment data |
| jp_d8TBDV5.als | 2015-04-17 20:01 | 1.5K | Alscript command file for PS/PDF output |
| jp_d8TBDV5.concise.ps | 2015-04-17 20:01 | 233K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_d8TBDV5.concise.pdf | 2015-04-17 20:01 | 15K | PDF prediction and alignment data |
| jp_d8TBDV5.full_MSA.fasta.withGaps.html | 2015-04-17 20:01 | 13K | Full MSA before JPred filters in FASTA |
| jp_d8TBDV5.full_MSA.fasta.noGaps.html | 2015-04-17 20:01 | 9.3K | Full MSA before JPred filters in FASTA |
![[TXT]](jp_d8TBDV5.svg.html) | jp_d8TBDV5.svg.html | 2015-04-17 20:01 | 20K | Jalview SVG summary of results |
| LOG | 2015-04-17 20:01 | 4.7K | JPred server log file |
| jp_d8TBDV5.tar.gz | 2015-04-17 20:01 | 39K | Archive containing complete results |
| README | 2016-02-15 12:20 | 2.1K | Results file descriptions |
| jp_d8TBDV5.results.html | 2016-02-15 12:20 | 28K | JPred results page |
| jp_d8TBDV5.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_d8TBDV5.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
