JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:02 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d3bhda_.name2015-04-17 16:24 0 Job name flag file
[ ]jp_5v93Exw.align2015-04-17 17:01 214KPSIBLAST alignment in FASTA format
[TXT]jp_5v93Exw.als2015-04-17 17:01 3.3KAlscript command file for PS/PDF output
[ ]jp_5v93Exw.blast.gz2015-04-17 17:00 1.2MCompressed PSIBLAST output file
[TXT]jp_5v93Exw.coils.csv2015-04-17 17:01 1.3KCOILS output in CSV format
[ ]jp_5v93Exw.coilseq.lupas_142015-04-17 17:01 8.9KCOILS output, window length 14
[ ]jp_5v93Exw.coilseq.lupas_212015-04-17 17:01 8.9KCOILS output, window length 21
[ ]jp_5v93Exw.coilseq.lupas_282015-04-17 17:01 8.9KCOILS output, window length 28
[ ]jp_5v93Exw.concise2015-04-17 17:01 423KPrediction: coiled-coil, solvent, alignment
[ ]jp_5v93Exw.concise.blc2015-04-17 17:01 215KBLC format prediction and alignment data
[ ]jp_5v93Exw.concise.fasta2015-04-17 17:01 216KPrediction: coiled-coil, solvent, alignment
[ ]jp_5v93Exw.concise.pdf2015-04-17 17:01 1.4MPDF prediction and alignment data
[ ]jp_5v93Exw.concise.ps2015-04-17 17:01 26MPrediction: coiled-coil, solvent, alignment
[ ]jp_5v93Exw.fasta2015-04-17 16:55 226 Input query sequence in FASTA format
[ ]jp_5v93Exw.full_MSA.fasta2015-04-17 17:01 4.4MFull MSA before JPred filters in FASTA
[TXT]jp_5v93Exw.full_MSA.fasta.noGaps.html2015-04-17 17:01 738KFull MSA before JPred filters in FASTA
[TXT]jp_5v93Exw.full_MSA.fasta.withGaps.html2015-04-17 17:01 15MFull MSA before JPred filters in FASTA
[ ]jp_5v93Exw.hmm2015-04-17 17:01 40KHHMer2 profile of the alignment
[TXT]jp_5v93Exw.html2015-04-17 17:01 414KHTML prediction and alignment data
[ ]jp_5v93Exw.input2015-04-17 16:24 218 Raw input data for analysis
[ ]jp_5v93Exw.jalview2015-04-17 17:01 5.1KJalview annotation file for alignment
[ ]jp_5v93Exw.jnet2015-04-17 17:01 7.7KJnet secondary structure output
[TXT]jp_5v93Exw.profile2015-04-17 16:58 34KPSIBLAST profile from alignment
[ ]jp_5v93Exw.pssm2015-04-17 17:01 45KPSIBLAST PSSM for Jnet
[TXT]jp_5v93Exw.results.html2016-02-15 12:20 93KJPred results page
[TXT]jp_5v93Exw.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5v93Exw.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5v93Exw.seq2015-04-17 16:24 226 Sequence data file
[TXT]jp_5v93Exw.simple.html2015-04-17 17:01 1.6KBrief HTML: sequence and prediction only
[TXT]jp_5v93Exw.svg.html2015-04-17 17:02 85KJalview SVG summary of results
[ ]jp_5v93Exw.tar.gz2015-04-17 17:02 4.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.