JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]d3cwca_.name2015-04-17 16:25 0 Job name flag file
[ ]jp_NJbbREb.input2015-04-17 16:25 376 Raw input data for analysis
[ ]jp_NJbbREb.fasta2015-04-17 16:55 387 Input query sequence in FASTA format
[ ]jp_NJbbREb.seq2015-04-17 16:25 387 Sequence data file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]jp_NJbbREb.coils.csv2015-04-17 17:03 2.2KCOILS output in CSV format
[TXT]jp_NJbbREb.simple.html2015-04-17 17:03 2.3KBrief HTML: sequence and prediction only
[TXT]LOG2015-04-17 17:04 4.7KJPred server log file
[TXT]jp_NJbbREb.als2015-04-17 17:03 5.4KAlscript command file for PS/PDF output
[ ]jp_NJbbREb.jalview2015-04-17 17:03 8.3KJalview annotation file for alignment
[TXT]jp_NJbbREb.results_jalview.html2016-02-24 17:18 13KJalview results options
[ ]jp_NJbbREb.jnet2015-04-17 17:03 13KJnet secondary structure output
[ ]jp_NJbbREb.coilseq.lupas_142015-04-17 17:03 15KCOILS output, window length 14
[ ]jp_NJbbREb.coilseq.lupas_212015-04-17 17:03 15KCOILS output, window length 21
[ ]jp_NJbbREb.coilseq.lupas_282015-04-17 17:03 15KCOILS output, window length 28
[TXT]jp_NJbbREb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_NJbbREb.profile2015-04-17 17:00 59KPSIBLAST profile from alignment
[ ]jp_NJbbREb.hmm2015-04-17 17:03 69KHHMer2 profile of the alignment
[ ]jp_NJbbREb.pssm2015-04-17 17:03 79KPSIBLAST PSSM for Jnet
[TXT]jp_NJbbREb.svg.html2015-04-17 17:04 149KJalview SVG summary of results
[TXT]jp_NJbbREb.results.html2016-02-15 12:21 157KJPred results page
[ ]jp_NJbbREb.concise.blc2015-04-17 17:03 387KBLC format prediction and alignment data
[ ]jp_NJbbREb.align2015-04-17 17:03 387KPSIBLAST alignment in FASTA format
[ ]jp_NJbbREb.concise.fasta2015-04-17 17:03 391KPrediction: coiled-coil, solvent, alignment
[TXT]jp_NJbbREb.html2015-04-17 17:03 615KHTML prediction and alignment data
[ ]jp_NJbbREb.concise2015-04-17 17:03 768KPrediction: coiled-coil, solvent, alignment
[TXT]jp_NJbbREb.full_MSA.fasta.noGaps.html2015-04-17 17:04 1.3MFull MSA before JPred filters in FASTA
[ ]jp_NJbbREb.concise.pdf2015-04-17 17:03 2.7MPDF prediction and alignment data
[ ]jp_NJbbREb.blast.gz2015-04-17 17:01 4.3MCompressed PSIBLAST output file
[ ]jp_NJbbREb.full_MSA.fasta2015-04-17 17:02 6.7MFull MSA before JPred filters in FASTA
[ ]jp_NJbbREb.tar.gz2015-04-17 17:04 10MArchive containing complete results
[TXT]jp_NJbbREb.full_MSA.fasta.withGaps.html2015-04-17 17:04 23MFull MSA before JPred filters in FASTA
[ ]jp_NJbbREb.concise.ps2015-04-17 17:03 49MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.