A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:58 | 4.7K | JPred server log file |
| README | 2016-02-15 12:21 | 2.1K | Results file descriptions |
| d3eyea_.name | 2015-04-17 17:40 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_Aqa3Tuu.align | 2015-04-17 20:57 | 177K | PSIBLAST alignment in FASTA format |
| jp_Aqa3Tuu.als | 2015-04-17 20:57 | 3.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_Aqa3Tuu.blast.gz | 2015-04-17 20:55 | 711K | Compressed PSIBLAST output file |
| jp_Aqa3Tuu.coils.csv | 2015-04-17 20:57 | 948 | COILS output in CSV format |
| jp_Aqa3Tuu.coilseq.lupas_14 | 2015-04-17 20:57 | 6.4K | COILS output, window length 14 |
| jp_Aqa3Tuu.coilseq.lupas_21 | 2015-04-17 20:57 | 6.4K | COILS output, window length 21 |
| jp_Aqa3Tuu.coilseq.lupas_28 | 2015-04-17 20:57 | 6.4K | COILS output, window length 28 |
| jp_Aqa3Tuu.concise | 2015-04-17 20:57 | 345K | Prediction: coiled-coil, solvent, alignment |
| jp_Aqa3Tuu.concise.blc | 2015-04-17 20:57 | 176K | BLC format prediction and alignment data |
| jp_Aqa3Tuu.concise.fasta | 2015-04-17 20:57 | 179K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_Aqa3Tuu.concise.pdf | 2015-04-17 20:57 | 1.2M | PDF prediction and alignment data |
| jp_Aqa3Tuu.concise.ps | 2015-04-17 20:57 | 22M | Prediction: coiled-coil, solvent, alignment |
| jp_Aqa3Tuu.fasta | 2015-04-17 19:00 | 168 | Input query sequence in FASTA format |
| jp_Aqa3Tuu.full_MSA.fasta | 2015-04-17 20:55 | 672K | Full MSA before JPred filters in FASTA |
| jp_Aqa3Tuu.full_MSA.fasta.noGaps.html | 2015-04-17 20:57 | 489K | Full MSA before JPred filters in FASTA |
| jp_Aqa3Tuu.full_MSA.fasta.withGaps.html | 2015-04-17 20:57 | 3.6M | Full MSA before JPred filters in FASTA |
| jp_Aqa3Tuu.hmm | 2015-04-17 20:57 | 29K | HHMer2 profile of the alignment |
| jp_Aqa3Tuu.html | 2015-04-17 20:57 | 391K | HTML prediction and alignment data |
| jp_Aqa3Tuu.input | 2015-04-17 17:40 | 160 | Raw input data for analysis |
| jp_Aqa3Tuu.jalview | 2015-04-17 20:57 | 3.9K | Jalview annotation file for alignment |
| jp_Aqa3Tuu.jnet | 2015-04-17 20:57 | 5.6K | Jnet secondary structure output |
| jp_Aqa3Tuu.profile | 2015-04-17 20:53 | 25K | PSIBLAST profile from alignment |
| jp_Aqa3Tuu.pssm | 2015-04-17 20:57 | 33K | PSIBLAST PSSM for Jnet |
| jp_Aqa3Tuu.results.html | 2016-02-15 12:21 | 72K | JPred results page |
| jp_Aqa3Tuu.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_Aqa3Tuu.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_Aqa3Tuu.seq | 2015-04-17 17:40 | 168 | Sequence data file |
| jp_Aqa3Tuu.simple.html | 2015-04-17 20:57 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_Aqa3Tuu.svg.html) | jp_Aqa3Tuu.svg.html | 2015-04-17 20:58 | 64K | Jalview SVG summary of results |
| jp_Aqa3Tuu.tar.gz | 2015-04-17 20:58 | 2.6M | Archive containing complete results |
