JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:09 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ju4a1.name2015-04-17 17:03 0 Job name flag file
[ ]jp_JkhrVEn.align2015-04-17 18:09 3.7KPSIBLAST alignment in FASTA format
[TXT]jp_JkhrVEn.als2015-04-17 18:09 7.2KAlscript command file for PS/PDF output
[ ]jp_JkhrVEn.blast.gz2015-04-17 18:09 17KCompressed PSIBLAST output file
[TXT]jp_JkhrVEn.coils.csv2015-04-17 18:09 3.1KCOILS output in CSV format
[ ]jp_JkhrVEn.coilseq.lupas_142015-04-17 18:09 22KCOILS output, window length 14
[ ]jp_JkhrVEn.coilseq.lupas_212015-04-17 18:09 22KCOILS output, window length 21
[ ]jp_JkhrVEn.coilseq.lupas_282015-04-17 18:09 22KCOILS output, window length 28
[ ]jp_JkhrVEn.concise2015-04-17 18:09 29KPrediction: coiled-coil, solvent, alignment
[ ]jp_JkhrVEn.concise.blc2015-04-17 18:09 11KBLC format prediction and alignment data
[ ]jp_JkhrVEn.concise.fasta2015-04-17 18:09 9.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_JkhrVEn.concise.pdf2015-04-17 18:09 67KPDF prediction and alignment data
[ ]jp_JkhrVEn.concise.ps2015-04-17 18:09 1.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_JkhrVEn.fasta2015-04-17 18:04 540 Input query sequence in FASTA format
[ ]jp_JkhrVEn.full_MSA.fasta2015-04-17 18:09 32KFull MSA before JPred filters in FASTA
[TXT]jp_JkhrVEn.full_MSA.fasta.noGaps.html2015-04-17 18:09 27KFull MSA before JPred filters in FASTA
[TXT]jp_JkhrVEn.full_MSA.fasta.withGaps.html2015-04-17 18:09 85KFull MSA before JPred filters in FASTA
[ ]jp_JkhrVEn.hmm2015-04-17 18:09 98KHHMer2 profile of the alignment
[TXT]jp_JkhrVEn.html2015-04-17 18:09 46KHTML prediction and alignment data
[ ]jp_JkhrVEn.input2015-04-17 17:03 527 Raw input data for analysis
[ ]jp_JkhrVEn.jalview2015-04-17 18:09 11KJalview annotation file for alignment
[ ]jp_JkhrVEn.jnet2015-04-17 18:09 19KJnet secondary structure output
[TXT]jp_JkhrVEn.profile2015-04-17 18:07 83KPSIBLAST profile from alignment
[ ]jp_JkhrVEn.pssm2015-04-17 18:09 112KPSIBLAST PSSM for Jnet
[TXT]jp_JkhrVEn.results.html2016-02-15 12:21 214KJPred results page
[TXT]jp_JkhrVEn.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JkhrVEn.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JkhrVEn.seq2015-04-17 17:03 540 Sequence data file
[TXT]jp_JkhrVEn.simple.html2015-04-17 18:09 3.0KBrief HTML: sequence and prediction only
[TXT]jp_JkhrVEn.svg.html2015-04-17 18:09 206KJalview SVG summary of results
[ ]jp_JkhrVEn.tar.gz2015-04-17 18:09 200KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.