JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:53 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3ju4a2.name2015-04-17 17:40 0 Job name flag file
[ ]jp_JWEO8E2.align2015-04-17 20:53 4.5KPSIBLAST alignment in FASTA format
[TXT]jp_JWEO8E2.als2015-04-17 20:53 3.0KAlscript command file for PS/PDF output
[ ]jp_JWEO8E2.blast.gz2015-04-17 20:53 11KCompressed PSIBLAST output file
[TXT]jp_JWEO8E2.coils.csv2015-04-17 20:53 930 COILS output in CSV format
[ ]jp_JWEO8E2.coilseq.lupas_142015-04-17 20:53 6.3KCOILS output, window length 14
[ ]jp_JWEO8E2.coilseq.lupas_212015-04-17 20:53 6.3KCOILS output, window length 21
[ ]jp_JWEO8E2.coilseq.lupas_282015-04-17 20:53 6.3KCOILS output, window length 28
[ ]jp_JWEO8E2.concise2015-04-17 20:53 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_JWEO8E2.concise.blc2015-04-17 20:53 6.7KBLC format prediction and alignment data
[ ]jp_JWEO8E2.concise.fasta2015-04-17 20:53 6.1KPrediction: coiled-coil, solvent, alignment
[ ]jp_JWEO8E2.concise.pdf2015-04-17 20:53 39KPDF prediction and alignment data
[ ]jp_JWEO8E2.concise.ps2015-04-17 20:53 746KPrediction: coiled-coil, solvent, alignment
[ ]jp_JWEO8E2.fasta2015-04-17 19:00 165 Input query sequence in FASTA format
[ ]jp_JWEO8E2.full_MSA.fasta2015-04-17 20:53 21KFull MSA before JPred filters in FASTA
[TXT]jp_JWEO8E2.full_MSA.fasta.noGaps.html2015-04-17 20:53 16KFull MSA before JPred filters in FASTA
[TXT]jp_JWEO8E2.full_MSA.fasta.withGaps.html2015-04-17 20:53 84KFull MSA before JPred filters in FASTA
[ ]jp_JWEO8E2.hmm2015-04-17 20:53 28KHHMer2 profile of the alignment
[TXT]jp_JWEO8E2.html2015-04-17 20:53 22KHTML prediction and alignment data
[ ]jp_JWEO8E2.input2015-04-17 17:40 157 Raw input data for analysis
[ ]jp_JWEO8E2.jalview2015-04-17 20:53 3.8KJalview annotation file for alignment
[ ]jp_JWEO8E2.jnet2015-04-17 20:53 5.5KJnet secondary structure output
[TXT]jp_JWEO8E2.profile2015-04-17 20:36 24KPSIBLAST profile from alignment
[ ]jp_JWEO8E2.pssm2015-04-17 20:53 32KPSIBLAST PSSM for Jnet
[TXT]jp_JWEO8E2.results.html2016-02-15 12:21 70KJPred results page
[TXT]jp_JWEO8E2.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JWEO8E2.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JWEO8E2.seq2015-04-17 17:40 165 Sequence data file
[TXT]jp_JWEO8E2.simple.html2015-04-17 20:53 1.5KBrief HTML: sequence and prediction only
[TXT]jp_JWEO8E2.svg.html2015-04-17 20:53 62KJalview SVG summary of results
[ ]jp_JWEO8E2.tar.gz2015-04-17 20:53 105KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.