JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:55 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3omya_.name2015-04-17 18:17 0 Job name flag file
[ ]jp_iYJitzn.align2015-04-17 20:55 2.0KPSIBLAST alignment in FASTA format
[TXT]jp_iYJitzn.als2015-04-17 20:55 1.6KAlscript command file for PS/PDF output
[ ]jp_iYJitzn.blast.gz2015-04-17 20:55 5.5KCompressed PSIBLAST output file
[TXT]jp_iYJitzn.coils.csv2015-04-17 20:55 336 COILS output in CSV format
[ ]jp_iYJitzn.coilseq.lupas_142015-04-17 20:55 2.1KCOILS output, window length 14
[ ]jp_iYJitzn.coilseq.lupas_212015-04-17 20:55 2.1KCOILS output, window length 21
[ ]jp_iYJitzn.coilseq.lupas_282015-04-17 20:55 2.1KCOILS output, window length 28
[ ]jp_iYJitzn.concise2015-04-17 20:55 6.0KPrediction: coiled-coil, solvent, alignment
[ ]jp_iYJitzn.concise.blc2015-04-17 20:55 2.9KBLC format prediction and alignment data
[ ]jp_iYJitzn.concise.fasta2015-04-17 20:55 2.7KPrediction: coiled-coil, solvent, alignment
[ ]jp_iYJitzn.concise.pdf2015-04-17 20:55 19KPDF prediction and alignment data
[ ]jp_iYJitzn.concise.ps2015-04-17 20:55 306KPrediction: coiled-coil, solvent, alignment
[ ]jp_iYJitzn.fasta2015-04-17 20:05 64 Input query sequence in FASTA format
[ ]jp_iYJitzn.full_MSA.fasta2015-04-17 20:55 5.0KFull MSA before JPred filters in FASTA
[TXT]jp_iYJitzn.full_MSA.fasta.noGaps.html2015-04-17 20:55 12KFull MSA before JPred filters in FASTA
[TXT]jp_iYJitzn.full_MSA.fasta.withGaps.html2015-04-17 20:55 18KFull MSA before JPred filters in FASTA
[ ]jp_iYJitzn.hmm2015-04-17 20:55 9.6KHHMer2 profile of the alignment
[TXT]jp_iYJitzn.html2015-04-17 20:55 15KHTML prediction and alignment data
[ ]jp_iYJitzn.input2015-04-17 18:17 58 Raw input data for analysis
[ ]jp_iYJitzn.jalview2015-04-17 20:55 1.9KJalview annotation file for alignment
[ ]jp_iYJitzn.jnet2015-04-17 20:55 2.0KJnet secondary structure output
[TXT]jp_iYJitzn.profile2015-04-17 20:38 8.6KPSIBLAST profile from alignment
[ ]jp_iYJitzn.pssm2015-04-17 20:55 11KPSIBLAST PSSM for Jnet
[TXT]jp_iYJitzn.results.html2016-02-15 12:21 31KJPred results page
[TXT]jp_iYJitzn.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_iYJitzn.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_iYJitzn.seq2015-04-17 18:17 64 Sequence data file
[TXT]jp_iYJitzn.simple.html2015-04-17 20:55 1.0KBrief HTML: sequence and prediction only
[TXT]jp_iYJitzn.svg.html2015-04-17 20:55 23KJalview SVG summary of results
[ ]jp_iYJitzn.tar.gz2015-04-17 20:55 46KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.