JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:11 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rlff1.name2015-04-17 17:05 0 Job name flag file
[ ]jp_6XypfaZ.align2015-04-17 18:11 54KPSIBLAST alignment in FASTA format
[TXT]jp_6XypfaZ.als2015-04-17 18:11 4.4KAlscript command file for PS/PDF output
[ ]jp_6XypfaZ.blast.gz2015-04-17 18:11 111KCompressed PSIBLAST output file
[TXT]jp_6XypfaZ.coils.csv2015-04-17 18:11 1.5KCOILS output in CSV format
[ ]jp_6XypfaZ.coilseq.lupas_142015-04-17 18:11 10KCOILS output, window length 14
[ ]jp_6XypfaZ.coilseq.lupas_212015-04-17 18:11 10KCOILS output, window length 21
[ ]jp_6XypfaZ.coilseq.lupas_282015-04-17 18:11 10KCOILS output, window length 28
[ ]jp_6XypfaZ.concise2015-04-17 18:11 114KPrediction: coiled-coil, solvent, alignment
[ ]jp_6XypfaZ.concise.blc2015-04-17 18:11 56KBLC format prediction and alignment data
[ ]jp_6XypfaZ.concise.fasta2015-04-17 18:11 56KPrediction: coiled-coil, solvent, alignment
[ ]jp_6XypfaZ.concise.pdf2015-04-17 18:11 337KPDF prediction and alignment data
[ ]jp_6XypfaZ.concise.ps2015-04-17 18:11 6.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_6XypfaZ.fasta2015-04-17 18:05 263 Input query sequence in FASTA format
[ ]jp_6XypfaZ.full_MSA.fasta2015-04-17 18:11 212KFull MSA before JPred filters in FASTA
[TXT]jp_6XypfaZ.full_MSA.fasta.noGaps.html2015-04-17 18:11 98KFull MSA before JPred filters in FASTA
[TXT]jp_6XypfaZ.full_MSA.fasta.withGaps.html2015-04-17 18:11 888KFull MSA before JPred filters in FASTA
[ ]jp_6XypfaZ.hmm2015-04-17 18:11 46KHHMer2 profile of the alignment
[TXT]jp_6XypfaZ.html2015-04-17 18:11 116KHTML prediction and alignment data
[ ]jp_6XypfaZ.input2015-04-17 17:05 254 Raw input data for analysis
[ ]jp_6XypfaZ.jalview2015-04-17 18:11 5.8KJalview annotation file for alignment
[ ]jp_6XypfaZ.jnet2015-04-17 18:11 9.0KJnet secondary structure output
[TXT]jp_6XypfaZ.profile2015-04-17 18:09 40KPSIBLAST profile from alignment
[ ]jp_6XypfaZ.pssm2015-04-17 18:11 53KPSIBLAST PSSM for Jnet
[TXT]jp_6XypfaZ.results.html2016-02-15 12:21 109KJPred results page
[TXT]jp_6XypfaZ.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_6XypfaZ.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_6XypfaZ.seq2015-04-17 17:05 263 Sequence data file
[TXT]jp_6XypfaZ.simple.html2015-04-17 18:11 1.9KBrief HTML: sequence and prediction only
[TXT]jp_6XypfaZ.svg.html2015-04-17 18:11 101KJalview SVG summary of results
[ ]jp_6XypfaZ.tar.gz2015-04-17 18:11 618KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.