JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:11 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d3rzna_.name2015-04-17 15:50 0 Job name flag file
[ ]jp_RUTfsrb.align2015-04-17 16:10 139KPSIBLAST alignment in FASTA format
[TXT]jp_RUTfsrb.als2015-04-17 16:10 2.4KAlscript command file for PS/PDF output
[ ]jp_RUTfsrb.blast.gz2015-04-17 16:10 850KCompressed PSIBLAST output file
[TXT]jp_RUTfsrb.coils.csv2015-04-17 16:10 1.2KCOILS output in CSV format
[ ]jp_RUTfsrb.coilseq.lupas_142015-04-17 16:10 8.7KCOILS output, window length 14
[ ]jp_RUTfsrb.coilseq.lupas_212015-04-17 16:10 8.7KCOILS output, window length 21
[ ]jp_RUTfsrb.coilseq.lupas_282015-04-17 16:10 8.7KCOILS output, window length 28
[ ]jp_RUTfsrb.concise2015-04-17 16:10 277KPrediction: coiled-coil, solvent, alignment
[ ]jp_RUTfsrb.concise.blc2015-04-17 16:10 140KBLC format prediction and alignment data
[ ]jp_RUTfsrb.concise.fasta2015-04-17 16:10 141KPrediction: coiled-coil, solvent, alignment
[ ]jp_RUTfsrb.concise.pdf2015-04-17 16:10 966KPDF prediction and alignment data
[ ]jp_RUTfsrb.concise.ps2015-04-17 16:10 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_RUTfsrb.fasta2015-04-17 16:05 221 Input query sequence in FASTA format
[ ]jp_RUTfsrb.full_MSA.fasta2015-04-17 16:10 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_RUTfsrb.full_MSA.fasta.noGaps.html2015-04-17 16:10 358KFull MSA before JPred filters in FASTA
[TXT]jp_RUTfsrb.full_MSA.fasta.withGaps.html2015-04-17 16:10 5.1MFull MSA before JPred filters in FASTA
[ ]jp_RUTfsrb.hmm2015-04-17 16:10 39KHHMer2 profile of the alignment
[TXT]jp_RUTfsrb.html2015-04-17 16:10 281KHTML prediction and alignment data
[ ]jp_RUTfsrb.input2015-04-17 15:50 213 Raw input data for analysis
[ ]jp_RUTfsrb.jalview2015-04-17 16:10 5.0KJalview annotation file for alignment
[ ]jp_RUTfsrb.jnet2015-04-17 16:10 7.6KJnet secondary structure output
[TXT]jp_RUTfsrb.profile2015-04-17 16:09 33KPSIBLAST profile from alignment
[ ]jp_RUTfsrb.pssm2015-04-17 16:10 44KPSIBLAST PSSM for Jnet
[TXT]jp_RUTfsrb.results.html2016-02-15 12:21 89KJPred results page
[TXT]jp_RUTfsrb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RUTfsrb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RUTfsrb.seq2015-04-17 15:50 221 Sequence data file
[TXT]jp_RUTfsrb.simple.html2015-04-17 16:10 1.5KBrief HTML: sequence and prediction only
[TXT]jp_RUTfsrb.svg.html2015-04-17 16:11 81KJalview SVG summary of results
[ ]jp_RUTfsrb.tar.gz2015-04-17 16:11 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.