JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:15 4.7KJPred server log file
[TXT]README2016-02-15 12:21 2.1KResults file descriptions
[TXT]d4j7da_.name2015-04-17 15:54 0 Job name flag file
[ ]jp_Zl10WRF.align2015-04-17 16:14 5.3KPSIBLAST alignment in FASTA format
[TXT]jp_Zl10WRF.als2015-04-17 16:14 1.9KAlscript command file for PS/PDF output
[ ]jp_Zl10WRF.blast.gz2015-04-17 16:14 34KCompressed PSIBLAST output file
[TXT]jp_Zl10WRF.coils.csv2015-04-17 16:14 546 COILS output in CSV format
[ ]jp_Zl10WRF.coilseq.lupas_142015-04-17 16:14 3.6KCOILS output, window length 14
[ ]jp_Zl10WRF.coilseq.lupas_212015-04-17 16:14 3.6KCOILS output, window length 21
[ ]jp_Zl10WRF.coilseq.lupas_282015-04-17 16:14 3.6KCOILS output, window length 28
[ ]jp_Zl10WRF.concise2015-04-17 16:14 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_Zl10WRF.concise.blc2015-04-17 16:14 6.6KBLC format prediction and alignment data
[ ]jp_Zl10WRF.concise.fasta2015-04-17 16:14 6.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_Zl10WRF.concise.pdf2015-04-17 16:14 42KPDF prediction and alignment data
[ ]jp_Zl10WRF.concise.ps2015-04-17 16:14 732KPrediction: coiled-coil, solvent, alignment
[ ]jp_Zl10WRF.fasta2015-04-17 16:11 100 Input query sequence in FASTA format
[ ]jp_Zl10WRF.full_MSA.fasta2015-04-17 16:14 38KFull MSA before JPred filters in FASTA
[TXT]jp_Zl10WRF.full_MSA.fasta.noGaps.html2015-04-17 16:14 52KFull MSA before JPred filters in FASTA
[TXT]jp_Zl10WRF.full_MSA.fasta.withGaps.html2015-04-17 16:14 122KFull MSA before JPred filters in FASTA
[ ]jp_Zl10WRF.hmm2015-04-17 16:14 16KHHMer2 profile of the alignment
[TXT]jp_Zl10WRF.html2015-04-17 16:14 23KHTML prediction and alignment data
[ ]jp_Zl10WRF.input2015-04-17 15:54 93 Raw input data for analysis
[ ]jp_Zl10WRF.jalview2015-04-17 16:14 2.5KJalview annotation file for alignment
[ ]jp_Zl10WRF.jnet2015-04-17 16:14 3.2KJnet secondary structure output
[TXT]jp_Zl10WRF.profile2015-04-17 16:13 14KPSIBLAST profile from alignment
[ ]jp_Zl10WRF.pssm2015-04-17 16:14 18KPSIBLAST PSSM for Jnet
[TXT]jp_Zl10WRF.results.html2016-02-15 12:21 45KJPred results page
[TXT]jp_Zl10WRF.results_jalview.html2016-02-24 17:19 13KJalview results options
[TXT]jp_Zl10WRF.results_jalview_app.html2016-02-24 17:19 16KHTML prediction and alignment data
[ ]jp_Zl10WRF.seq2015-04-17 15:54 100 Sequence data file
[TXT]jp_Zl10WRF.simple.html2015-04-17 16:14 1.1KBrief HTML: sequence and prediction only
[TXT]jp_Zl10WRF.svg.html2015-04-17 16:14 36KJalview SVG summary of results
[ ]jp_Zl10WRF.tar.gz2015-04-17 16:15 125KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.