JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_9zeiGyO.als2015-04-17 19:21 2.5KAlscript command file for PS/PDF output
[ ]jp_9zeiGyO.tar.gz2015-04-17 19:21 56KArchive containing complete results
[ ]jp_9zeiGyO.concise.blc2015-04-17 19:21 3.0KBLC format prediction and alignment data
[TXT]jp_9zeiGyO.simple.html2015-04-17 19:21 1.4KBrief HTML: sequence and prediction only
[TXT]jp_9zeiGyO.coils.csv2015-04-17 19:21 888 COILS output in CSV format
[ ]jp_9zeiGyO.coilseq.lupas_142015-04-17 19:21 6.0KCOILS output, window length 14
[ ]jp_9zeiGyO.coilseq.lupas_212015-04-17 19:21 6.0KCOILS output, window length 21
[ ]jp_9zeiGyO.coilseq.lupas_282015-04-17 19:21 6.0KCOILS output, window length 28
[ ]jp_9zeiGyO.blast.gz2015-04-17 19:21 2.7KCompressed PSIBLAST output file
[ ]jp_9zeiGyO.full_MSA.fasta2015-04-17 19:21 1.8KFull MSA before JPred filters in FASTA
[TXT]jp_9zeiGyO.full_MSA.fasta.noGaps.html2015-04-17 19:21 2.7KFull MSA before JPred filters in FASTA
[TXT]jp_9zeiGyO.full_MSA.fasta.withGaps.html2015-04-17 19:21 4.4KFull MSA before JPred filters in FASTA
[ ]jp_9zeiGyO.hmm2015-04-17 19:21 27KHHMer2 profile of the alignment
[TXT]jp_9zeiGyO.html2015-04-17 19:21 16KHTML prediction and alignment data
[TXT]jp_9zeiGyO.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_9zeiGyO.fasta2015-04-17 19:17 157 Input query sequence in FASTA format
[TXT]jp_9zeiGyO.results.html2016-02-15 12:17 68KJPred results page
[TXT]LOG2015-04-17 19:21 4.7KJPred server log file
[TXT]jp_9zeiGyO.svg.html2015-04-17 19:21 60KJalview SVG summary of results
[ ]jp_9zeiGyO.jalview2015-04-17 19:21 3.7KJalview annotation file for alignment
[TXT]jp_9zeiGyO.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_9zeiGyO.jnet2015-04-17 19:21 5.3KJnet secondary structure output
[TXT]d1ikpa3.name2015-04-17 17:49 0 Job name flag file
[ ]jp_9zeiGyO.concise.pdf2015-04-17 19:21 20KPDF prediction and alignment data
[ ]jp_9zeiGyO.pssm2015-04-17 19:21 31KPSIBLAST PSSM for Jnet
[ ]jp_9zeiGyO.align2015-04-17 19:21 800 PSIBLAST alignment in FASTA format
[TXT]jp_9zeiGyO.profile2015-04-17 19:19 23KPSIBLAST profile from alignment
[ ]jp_9zeiGyO.concise2015-04-17 19:21 7.6KPrediction: coiled-coil, solvent, alignment
[ ]jp_9zeiGyO.concise.fasta2015-04-17 19:21 2.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_9zeiGyO.concise.ps2015-04-17 19:21 348KPrediction: coiled-coil, solvent, alignment
[ ]jp_9zeiGyO.input2015-04-17 17:49 150 Raw input data for analysis
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[ ]jp_9zeiGyO.seq2015-04-17 17:49 157 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.