JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:53 4.7KJPred server log file
[TXT]README2016-02-15 12:20 2.1KResults file descriptions
[TXT]d2i5vo_.name2015-04-17 16:54 0 Job name flag file
[ ]jp_3bHek5_.align2015-04-17 17:52 8.9KPSIBLAST alignment in FASTA format
[TXT]jp_3bHek5_.als2015-04-17 17:52 4.3KAlscript command file for PS/PDF output
[ ]jp_3bHek5_.blast.gz2015-04-17 17:52 20KCompressed PSIBLAST output file
[TXT]jp_3bHek5_.coils.csv2015-04-17 17:52 1.5KCOILS output in CSV format
[ ]jp_3bHek5_.coilseq.lupas_142015-04-17 17:52 10KCOILS output, window length 14
[ ]jp_3bHek5_.coilseq.lupas_212015-04-17 17:52 10KCOILS output, window length 21
[ ]jp_3bHek5_.coilseq.lupas_282015-04-17 17:52 10KCOILS output, window length 28
[ ]jp_3bHek5_.concise2015-04-17 17:52 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_3bHek5_.concise.blc2015-04-17 17:52 12KBLC format prediction and alignment data
[ ]jp_3bHek5_.concise.fasta2015-04-17 17:52 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_3bHek5_.concise.pdf2015-04-17 17:52 74KPDF prediction and alignment data
[ ]jp_3bHek5_.concise.ps2015-04-17 17:52 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_3bHek5_.fasta2015-04-17 17:51 262 Input query sequence in FASTA format
[ ]jp_3bHek5_.full_MSA.fasta2015-04-17 17:52 42KFull MSA before JPred filters in FASTA
[TXT]jp_3bHek5_.full_MSA.fasta.noGaps.html2015-04-17 17:52 43KFull MSA before JPred filters in FASTA
[TXT]jp_3bHek5_.full_MSA.fasta.withGaps.html2015-04-17 17:52 142KFull MSA before JPred filters in FASTA
[ ]jp_3bHek5_.hmm2015-04-17 17:52 46KHHMer2 profile of the alignment
[TXT]jp_3bHek5_.html2015-04-17 17:52 34KHTML prediction and alignment data
[ ]jp_3bHek5_.input2015-04-17 16:54 253 Raw input data for analysis
[ ]jp_3bHek5_.jalview2015-04-17 17:52 5.7KJalview annotation file for alignment
[ ]jp_3bHek5_.jnet2015-04-17 17:52 9.0KJnet secondary structure output
[TXT]jp_3bHek5_.profile2015-04-17 17:51 39KPSIBLAST profile from alignment
[ ]jp_3bHek5_.pssm2015-04-17 17:52 53KPSIBLAST PSSM for Jnet
[TXT]jp_3bHek5_.results.html2016-02-15 12:20 109KJPred results page
[TXT]jp_3bHek5_.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_3bHek5_.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_3bHek5_.seq2015-04-17 16:54 262 Sequence data file
[TXT]jp_3bHek5_.simple.html2015-04-17 17:52 1.9KBrief HTML: sequence and prediction only
[TXT]jp_3bHek5_.svg.html2015-04-17 17:53 101KJalview SVG summary of results
[ ]jp_3bHek5_.tar.gz2015-04-17 17:53 165KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.