New layout, works 1.4 and 1.5
31 lines of code changed in:
correct border width
1 lines of code changed in:
JavaHelp files added
509 lines of code changed in:
JavaHelp files added
156 lines of code changed in:
ColourSchemeKey now in documentation
16 lines of code changed in:
system.exit or destroy if applet or app
8 lines of code changed in:
change order of menuitems
7 lines of code changed in:
don't system.ext
1 lines of code changed in:
now has key listener
21 lines of code changed in:
clustalColour bug fixed, clear selection
3 lines of code changed in:
extends Applet
45 lines of code changed in:
Adds regex.jar to classpath
29 lines of code changed in:
warning! this is obfuscated
0 lines of code changed in:
bug in compare fixed
5 lines of code changed in:
returns color.white if the underlying colourscheme is null
7 lines of code changed in:
creates new groups when selecting branches of the tree
44 lines of code changed in:
now uses 1.1 friendly regex
28 lines of code changed in:
Clear selection when deleting all groups
2 lines of code changed in:
Allow removal of colour when deleting groups
8 lines of code changed in:
remove a few imports
0 lines of code changed in:
Nucleotide colours added
17 lines of code changed in:
New colourScheme
37 lines of code changed in:
Create group from search added
24 lines of code changed in:
Delete groups added, nucleotide color added
34 lines of code changed in:
ForegroundColor is darker.darker.darker
1 lines of code changed in:
if stretchGroup is null, set avRubberbandGroup new group
5 lines of code changed in:
<= y2 is now < y2
1 lines of code changed in:
Commented out code removed
5 lines of code changed in:
Fill rect white
2 lines of code changed in:
Check if graphics is null in labelSize
2 lines of code changed in:
False changed to true
0 lines of code changed in:
SuperGroup added
39 lines of code changed in:
System.out removed
0 lines of code changed in:
SuperGroups added
147 lines of code changed in:
new images
0 lines of code changed in:
Clustal align DNA spinner added
95 lines of code changed in:
Fix overviewPanel bugs
14 lines of code changed in:
RefreshPanels after a colour change
2 lines of code changed in:
Dont use addToDesktop for splashscreen
13 lines of code changed in:
ClustalX added to ColourProperties
8 lines of code changed in:
SetSecondaryPanel
25 lines of code changed in:
SetSecondaryPanel visible
9 lines of code changed in:
Works out exisiting colur of a group
247 lines of code changed in:
New class
0 lines of code changed in:
JBuilder Project file update
23 lines of code changed in:
Jemboss(emboss 2.9.0) classes to provide client functionality to
Jalview.
4 lines of code changed in:
first jemboss clustalw client for jalview.
7 lines of code changed in:
support for jemboss server interaction.
0 lines of code changed in:
bugfix for writing fasta file without gap characters.
1 lines of code changed in:
Implemented clustal alignment via jemboss.
28 lines of code changed in:
Spaces
2 lines of code changed in:
Various color bugs sorted out
104 lines of code changed in:
Dispalys rule along top of output
27 lines of code changed in:
Hscrollbar is shortened
10 lines of code changed in:
Return color.white if a gap char is detected
3 lines of code changed in:
getValue method added
5 lines of code changed in:
Maintain PID or conservation status when changing colour
101 lines of code changed in:
SequenceGroup is now an array
17 lines of code changed in:
Send array of groups to renderer
28 lines of code changed in:
Initial selection bug fixed
13 lines of code changed in:
FindAllGroups added
19 lines of code changed in:
Scrollbar at bottom of screen
1 lines of code changed in:
GetResidueBoxColour altered for faster rendering
36 lines of code changed in:
Renderer already has graphics context
1 lines of code changed in:
getResidueBoxColour has been removed for faster rendering
1 lines of code changed in:
Ignores gaps when searching
22 lines of code changed in:
random change 3
1 lines of code changed in:
another dummy.
1 lines of code changed in:
Group editing is done by control and alt key down
15 lines of code changed in:
regular expression added
15 lines of code changed in:
delete gaps bug fixed
1 lines of code changed in:
must append file:/// at beginning of file launch
1 lines of code changed in:
irrelevant comment.
2 lines of code changed in:
Displays number of matches found in search
12 lines of code changed in: