February 2005 Commit Log

Number of Commits:
87
Number of Active Developers:
2
jimp 2005-02-28 10:47

added uniquify sequence id assertion.

39 lines of code changed in:

jimp 2005-02-28 10:45

partial implementation of JNet server prediction.

175 lines of code changed in:

jimp 2005-02-28 10:43

first stab at a JPredClient.

11 lines of code changed in:

jimp 2005-02-23 15:57

basic jpred concise prediction reader.

236 lines of code changed in:

jimp 2005-02-23 15:53

new resources location.

0 lines of code changed in:

jimp 2005-02-23 15:51

rearranged project structure

49 lines of code changed in:

jimp 2005-02-23 15:51

making Jemboss client more configurable.

1 lines of code changed in:

jimp 2005-02-23 15:48

bug fix for unaligned sequence sets and clustal colours (obviated by
'aligned' test).

2 lines of code changed in:

jimp 2005-02-23 15:47

rearranged project structure

43 lines of code changed in:

jimp 2005-02-23 11:57

new ant build for Jalview.

75 lines of code changed in:

andrew 2005-02-22 12:18

add titles

145 lines of code changed in:

andrew 2005-02-22 11:46

add history for cut and paste

4 lines of code changed in:

andrew 2005-02-22 11:44

updated help files

139 lines of code changed in:

andrew 2005-02-21 17:09

images moved

2 lines of code changed in:

andrew 2005-02-21 17:08

note of user_defined_colours added

1 lines of code changed in:

andrew 2005-02-21 17:02

image moved

1 lines of code changed in:

andrew 2005-02-21 17:01

Sets USER_DEFINED_COLOUR as property

39 lines of code changed in:

andrew 2005-02-21 16:59

images in image folder

0 lines of code changed in:

andrew 2005-02-21 16:57

Updated help pages

40 lines of code changed in:

andrew 2005-02-21 16:51

Updated help pages

1217 lines of code changed in:

andrew 2005-02-18 12:28

treepanel is now internalframe, has a menu

60 lines of code changed in:

andrew 2005-02-18 12:27

show sequence features is false by default

1 lines of code changed in:

andrew 2005-02-18 12:27

tree is printable

54 lines of code changed in:

andrew 2005-02-18 12:26

treepanel is now internalframe

43 lines of code changed in:

andrew 2005-02-18 12:25

featuresAdded = false

1 lines of code changed in:

andrew 2005-02-16 17:56

wrap alignment id drawing bug fixed

1 lines of code changed in:

andrew 2005-02-16 17:56

Save as jpg added

99 lines of code changed in:

andrew 2005-02-15 11:19

Fix bug when creating treepanel

2 lines of code changed in:

andrew 2005-02-15 10:46

abovePIDThreshold added to viewport

19 lines of code changed in:

andrew 2005-02-15 10:46

no action if supplied colour isnull

3 lines of code changed in:

andrew 2005-02-15 10:46

catch any pid or conservation related bugs here

4 lines of code changed in:

andrew 2005-02-15 10:45

add applytoallgroups colouring option

128 lines of code changed in:

andrew 2005-02-11 14:07

must add all features even if start and end res are beyond sequence length

0 lines of code changed in:

andrew 2005-02-11 12:44

move sequences up and down

44 lines of code changed in:

andrew 2005-02-11 12:44

add VK_F key, up down

11 lines of code changed in:

andrew 2005-02-11 12:43

end of seq adjustments

2 lines of code changed in:

andrew 2005-02-11 12:43

dont add new seqs to group

1 lines of code changed in:

andrew 2005-02-11 11:04

watch out for end of seq in findposition

1 lines of code changed in:

andrew 2005-02-11 11:03

update start and end res when copying

3 lines of code changed in:

andrew 2005-02-11 10:47

add control a key to select all

4 lines of code changed in:

andrew 2005-02-11 10:38

bug fixed if featureEnd is beyond end of sequence

22 lines of code changed in:

andrew 2005-02-10 18:12

watch end of sequence when asking for (start, end)

2 lines of code changed in:

andrew 2005-02-10 18:12

dont add new sequences to null groups!

0 lines of code changed in:

andrew 2005-02-10 17:59

change of label text

1 lines of code changed in:

andrew 2005-02-10 17:54

cut and paste now in main menu

0 lines of code changed in:

andrew 2005-02-10 17:53

trimmed down

1 lines of code changed in:

andrew 2005-02-10 17:52

Key listener works!!

24 lines of code changed in:

andrew 2005-02-10 17:52

Cut and paste implemented

206 lines of code changed in:

andrew 2005-02-10 13:26

check that we're not off the end of a sequence

4 lines of code changed in:

andrew 2005-02-10 13:23

check that mouse is over sequence if unaligned

20 lines of code changed in:

andrew 2005-02-10 13:21

edit sequence name method

2 lines of code changed in:

andrew 2005-02-10 13:21

remove try catch loop

1 lines of code changed in:

andrew 2005-02-10 13:20

isAligned method added, check before making tree

8 lines of code changed in:

andrew 2005-02-10 13:20

isAligned method added

13 lines of code changed in:

andrew 2005-02-10 13:19

removed

0 lines of code changed in:

andrew 2005-02-09 16:07

Start the thread

1 lines of code changed in:

andrew 2005-02-09 15:31

Display tooltip updated

2 lines of code changed in:

andrew 2005-02-09 15:30

Correct number of ids is drawn

1 lines of code changed in:

andrew 2005-02-09 15:30

Fixed display bugs when feature is off the screen

7 lines of code changed in:

andrew 2005-02-09 15:29

Blasts asynchronously

108 lines of code changed in:

andrew 2005-02-08 18:40

Set property returns key

4 lines of code changed in:

andrew 2005-02-08 18:40

Looks for missing ids using BlastClient

97 lines of code changed in:

andrew 2005-02-08 18:39

new class

119 lines of code changed in:

jimp 2005-02-08 16:04

formatting imports.

6 lines of code changed in:

andrew 2005-02-07 17:40

Properties bug fixed

2 lines of code changed in:

andrew 2005-02-07 17:09

New class

160 lines of code changed in:

andrew 2005-02-07 17:08

Use Cache.getProperty

8 lines of code changed in:

andrew 2005-02-07 17:08

Settooltip for sequence feature

7 lines of code changed in:

andrew 2005-02-07 17:07

Use Cache.getProperty

6 lines of code changed in:

andrew 2005-02-07 17:06

load properties on startup

8 lines of code changed in:

andrew 2005-02-07 17:06

Properties added

68 lines of code changed in:

andrew 2005-02-07 17:05

Now displays sequence features

2 lines of code changed in:

andrew 2005-02-07 17:05

New class for fetching sequence features

3 lines of code changed in:

andrew 2005-02-04 18:27

SequenceFeature display added

391 lines of code changed in:

andrew 2005-02-02 17:17

Modified for wrapAlignement

162 lines of code changed in:

andrew 2005-02-02 16:14

Remove test image

0 lines of code changed in:

andrew 2005-02-02 16:12

Modified for wrappingAlignment

202 lines of code changed in:

andrew 2005-02-01 19:04

Apply to all groups method added

37 lines of code changed in:

andrew 2005-02-01 19:03

Update PID or conservationSlider if necessary

59 lines of code changed in:

andrew 2005-02-01 19:03

Bugs in column selection fixed

25 lines of code changed in:

andrew 2005-02-01 19:03

Conservation and PID colouring methods updated, also remove group added

44 lines of code changed in:

andrew 2005-02-01 19:02

Conservation and PID colouring methods updated

156 lines of code changed in:

andrew 2005-02-01 19:01

Secondary panel is hidden for the moment

1 lines of code changed in:

andrew 2005-02-01 19:00

Enable wrap menu item

1 lines of code changed in:

andrew 2005-02-01 19:00

Ability to apply to all groups added

34 lines of code changed in:

andrew 2005-02-01 18:59

No need for drawableSequence

27 lines of code changed in:

andrew 2005-02-01 18:58

Clustal colours now work

80 lines of code changed in:

January 2005 »

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