December 2005 Commit Log

Number of Commits:
86
Number of Active Developers:
2
andrew 2005-12-22 17:07

Check for null StringBuffer in getPDB

6 lines of code changed in:

andrew 2005-12-22 16:46

Check for null StringBuffer in getPDB

4 lines of code changed in:

andrew 2005-12-22 16:01

Jar file 20% smaller

73 lines of code changed in:

andrew 2005-12-22 16:00

Reduced jar size by 20%

899 lines of code changed in:

andrew 2005-12-22 16:00

Allow embedded applet

33 lines of code changed in:

andrew 2005-12-22 15:59

graph now has type, not a boolean

12 lines of code changed in:

andrew 2005-12-22 15:59

Watch for trim left/right null widths

15 lines of code changed in:

andrew 2005-12-22 15:58

REGEX CANNOT BE STATIC

3 lines of code changed in:

andrew 2005-12-22 15:58

Wrapped search scrolls to visible result

18 lines of code changed in:

andrew 2005-12-22 15:57

Remove import

2 lines of code changed in:

andrew 2005-12-22 15:57

Annotations.Graph can be bargraph, linegraph

9 lines of code changed in:

andrew 2005-12-22 15:56

Remove printPoints

1 lines of code changed in:

andrew 2005-12-22 15:56

Remove main method

1 lines of code changed in:

andrew 2005-12-22 15:55

Load assocated tree

1 lines of code changed in:

andrew 2005-12-22 15:55

Annotations.Graph can be bargraph, linegraph

70 lines of code changed in:

jimp 2005-12-16 15:34

Todo notes for feature issue: 0011711

4 lines of code changed in:

andrew 2005-12-15 15:09

Close body and html, dont put in table

3 lines of code changed in:

andrew 2005-12-15 14:54

Prevents confusing extra line being output in Java Console

2 lines of code changed in:

andrew 2005-12-15 14:17

SetMenuBar(null) when closing frames. Prevents a bug in JVMs post 1.4

2 lines of code changed in:

andrew 2005-12-13 11:09

Broken link fixed

2 lines of code changed in:

andrew 2005-12-13 11:01

Broken link fixed

3 lines of code changed in:

andrew 2005-12-13 10:37

Version update

8 lines of code changed in:

andrew 2005-12-13 10:36

Builds web TOC for help files

90 lines of code changed in:

andrew 2005-12-13 10:36

Link to applets.html

12 lines of code changed in:

andrew 2005-12-12 18:01

Applet new features

3 lines of code changed in:

andrew 2005-12-12 18:00

Remove unused mappings

0 lines of code changed in:

andrew 2005-12-12 18:00

GetAlignment uses active alignment window

15 lines of code changed in:

andrew 2005-12-12 17:57

Inlude mcview in build applet

2 lines of code changed in:

andrew 2005-12-12 15:53

Change dataset name

2 lines of code changed in:

andrew 2005-12-12 15:51

Change title

2 lines of code changed in:

andrew 2005-12-12 14:47

Release date

1 lines of code changed in:

andrew 2005-12-12 14:47

DOnt mention WSWublast for now

1 lines of code changed in:

andrew 2005-12-12 14:20

Jbinit

10 lines of code changed in:

andrew 2005-12-12 14:15

Font size label

7 lines of code changed in:

andrew 2005-12-12 14:14

Dont bother with WSWUBlast for now

13 lines of code changed in:

andrew 2005-12-12 13:31

FOnt size -3 for labels

2 lines of code changed in:

andrew 2005-12-12 13:31

Check if user cancelled before making image

14 lines of code changed in:

andrew 2005-12-12 12:24

Set font italic

1 lines of code changed in:

andrew 2005-12-12 12:24

Font changes on export png/eps

23 lines of code changed in:

andrew 2005-12-12 10:45

Getmask is slightly wider

8 lines of code changed in:

jimp 2005-12-09 18:48

added description of how PDB structures can be associated with
sequences (and so viewed in the PDB viewer).

29 lines of code changed in:

jimp 2005-12-09 18:47

Rearranged 'What's new' and debugged/verified the sequence fetcher and
pdbviewer/viewingpdbs entries.

96 lines of code changed in:

jimp 2005-12-09 16:02

fixed pdbentry creation and multiple uniprot or pdb entry retrieval.

735 lines of code changed in:

andrew 2005-12-09 14:25

Change order of repaint if wrapped

2 lines of code changed in:

andrew 2005-12-09 14:10

Applet Structure viewer has all colours available

150 lines of code changed in:

andrew 2005-12-09 13:35

Can be used by PDBViewer

56 lines of code changed in:

andrew 2005-12-09 13:34

All colours added to Structure viewer

259 lines of code changed in:

andrew 2005-12-09 11:13

Only load the tree file once, for first alignment

28 lines of code changed in:

andrew 2005-12-09 11:12

Keylistener added to frame and seqcanvas

73 lines of code changed in:

jimp 2005-12-08 16:45

context dependent title for when called from desktop or alignment window menu

4 lines of code changed in:

jimp 2005-12-08 16:19

changed WhatsNew to a folder and modified preferences and seqfetcher
entries.

67 lines of code changed in:

andrew 2005-12-08 16:18

If dataset seq exists for paste to existing alignment, make a ref

3 lines of code changed in:

jimp 2005-12-08 16:10

added some error checking and instruction dialogs

32 lines of code changed in:

andrew 2005-12-08 15:39

Should call deselectAll when escape pressed

1 lines of code changed in:

andrew 2005-12-08 15:34

Dont repaint if component has been removed

5 lines of code changed in:

andrew 2005-12-08 15:34

SeqColoursReady

4 lines of code changed in:

jimp 2005-12-08 14:09

modified jnet parsing exception report string.

1 lines of code changed in:

jimp 2005-12-08 14:08

exception checks for (de)uniquify

3 lines of code changed in:

andrew 2005-12-08 13:42

Clustal colour added to table

27 lines of code changed in:

andrew 2005-12-08 12:04

SeqColoursReady boolean added

8 lines of code changed in:

andrew 2005-12-08 12:04

UnknownSequences.remove moved out of loop

4 lines of code changed in:

andrew 2005-12-08 11:54

showAnnotation state loaded

2 lines of code changed in:

andrew 2005-12-08 11:54

null pointer in wrapped mode, click near sequence

4 lines of code changed in:

andrew 2005-12-08 10:58

new help

150 lines of code changed in:

andrew 2005-12-08 10:57

Updated help

100 lines of code changed in:

andrew 2005-12-08 09:25

Revert to version 1.25

1 lines of code changed in:

andrew 2005-12-08 09:18

After merge

82 lines of code changed in:

andrew 2005-12-08 09:17

EqualsignoreCase

10 lines of code changed in:

andrew 2005-12-07 15:08

License added to new files

198 lines of code changed in:

andrew 2005-12-06 18:07

View menu added to TOC

6 lines of code changed in:

andrew 2005-12-06 18:06

Slightly larger

1 lines of code changed in:

andrew 2005-12-06 17:42

Allow for DNA alignments in imgMap

10 lines of code changed in:

andrew 2005-12-06 17:14

Make ImageMap for features as well as groups

84 lines of code changed in:

andrew 2005-12-06 17:14

Add features to dataset

2 lines of code changed in:

andrew 2005-12-06 12:19

Add internalFrameActivated listener

10 lines of code changed in:

andrew 2005-12-06 12:08

After merge

71 lines of code changed in:

andrew 2005-12-06 12:08

Readded

25 lines of code changed in:

andrew 2005-12-06 12:07

hasDistances added

32 lines of code changed in:

andrew 2005-12-06 12:03

After merge

2874 lines of code changed in:

andrew 2005-12-06 11:51

after merge

54 lines of code changed in:

andrew 2005-12-06 11:42

after merge

6070 lines of code changed in:

andrew 2005-12-06 11:42

After merge

0 lines of code changed in:

andrew 2005-12-06 11:41

After branch merge

1069 lines of code changed in:

andrew 2005-12-06 11:39

PDB structure viewer updated

2736 lines of code changed in:

andrew 2005-12-06 11:38

Saves features

135 lines of code changed in:

andrew 2005-12-06 11:37

New help files

161 lines of code changed in:

November 2005 »

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