jmol 12 patch - ensure we replace the correct filename in the jmol script before it gets executed
6 lines of code changed in:
upgrading structure/sequence binding so that a structure view can contain many pdb files
627 lines of code changed in:
new ajax api methods for linking existing jmol viewers with sequences in an alignframe
43 lines of code changed in:
interfaces implemented by jalview renderers
32 lines of code changed in:
proxy interface for structure viewers that jalview works with
14 lines of code changed in:
new abstract proxy for use by applet and application
824 lines of code changed in:
upgrade to InstallAnywhere 2010 and ensure minimum vm size is 32M, and max is 256M
1256 lines of code changed in:
patch for npe that occurs for importing Jalview projects where group conservation is displayed but no conservation for alignment is displayed - (observed during Jmol patching)
6 lines of code changed in:
typo bugfix
1 lines of code changed in:
catch OOM earlier * JAL-595
24 lines of code changed in:
drop down selection of different parameter sets
301 lines of code changed in:
edit jws2 job parameters before running job
540 lines of code changed in:
prototype - implementation in progress JAL-591
907 lines of code changed in:
set program name to service type (see related issues to JAL-493 re setting provenance correctly)
8 lines of code changed in:
organisation by host and service type
80 lines of code changed in:
generic action text method
1 lines of code changed in:
ensure service menu is rebuilt after update listeners registered, and flatten JWS2 service tree.
10 lines of code changed in:
2.6 docs
668 lines of code changed in:
new web services preference tab (JAL-589)
658 lines of code changed in:
rejigged change support to make it (more) reliable
409 lines of code changed in:
new jmol/pdb relates api calls
46 lines of code changed in:
added new jmol to install manifest
3 lines of code changed in:
update jmol jar version for applet
1 lines of code changed in:
remove source annotations
0 lines of code changed in:
update to Jmol series 12 (JAL-582)
240 lines of code changed in:
NPE in hashtable constructor
24 lines of code changed in:
update latest version
0 lines of code changed in:
stop multiple dialogs appearing one after another (in progress for JAL-414)
0 lines of code changed in:
add patch for JAL-572 to release history
5 lines of code changed in:
patch for JAL-572
0 lines of code changed in:
added min-jws2 jar to classpath
36 lines of code changed in:
JGoogleAnalytics on classpath.
265 lines of code changed in:
documented the -colour command line argument.
13 lines of code changed in:
stockholm added as readable format (Lauren Lui commit)
4 lines of code changed in:
ensure enfin service is started in background when desktop is displayed
9 lines of code changed in:
jalview 2.5.1 release notes
61 lines of code changed in:
patch for JAL-556 - more robust mapping of sequence to structure sequence with correct substitution matrix
5 lines of code changed in:
patch for JAL-556
23 lines of code changed in:
patched for JAL-531 - only display full symbol distribution stats on tooltip/annotation label when the sequenceLogo is displayed.
56 lines of code changed in:
patch for JAL-545 - make deep copy of feature settings
23 lines of code changed in:
patch for JAL-555
7 lines of code changed in:
paste menu display on OSX Leopard * JAL-557
80 lines of code changed in:
OSX look and feel JAL-577
9 lines of code changed in:
followSelections flag now set via user preferences, and disabled for 2.5.1 * JAL-574 and * JAL-576
5 lines of code changed in:
better test for when to update column selection when receiving a selection message * JAL-574
11 lines of code changed in:
trim hidden regions outside selection when copying selected region to clipboard * JAL-573
15 lines of code changed in:
Patch for incorrect column selection when hidden regions are present * JAL-558
22 lines of code changed in:
patch for JAL-542
30 lines of code changed in:
Fix for * JAL-541
1 lines of code changed in:
resolution for * JAL-553
4 lines of code changed in:
update group annotation for new treegroups (JAL-552)
9 lines of code changed in:
correct popup menu, ensure panel doesn't disappear when empty (patches for JAL-554 and JAL-570 and JAL-562) and first patch for annotation label redraw (JAL-563)
30 lines of code changed in:
first patch for JAL-563 - attempt to relayout annotation panel after adjusting heights
8 lines of code changed in:
ensure panel doesn't disappear when empty (patches for JAL-554 and JAL-570 and JAL-562)
3 lines of code changed in:
patches for JAL-554 and JAL-570
focus is explicitly handed back to caller (JAL-566)
35 lines of code changed in:
focus is explicitly handed back to caller (JAL-566)
4 lines of code changed in:
focus is explicitly handed back to caller (JAL-566)
6 lines of code changed in:
typo (ahem)
1 lines of code changed in:
patch re JAL-554
78 lines of code changed in:
patch ensuring annotation is output correctly re * JAL-554
21 lines of code changed in:
patch and error reports re JAL-554
0 lines of code changed in:
javadoc re JAL-554
1 lines of code changed in:
patch re JAL-554
11 lines of code changed in:
fix and warning message in case the JWS2 jar is not available.
64 lines of code changed in:
patches for # JAL-254 and JAL-548
13 lines of code changed in:
May 2010 »